m_correa_m, to bioinformatics

Deep learning for protein structure prediction and design—progress and applications
https://www.embopress.org/doi/full/10.1038/s44320-024-00016-x

gnuhealth, to Freedom
@gnuhealth@mastodon.social avatar
F2erron, to bioinformatics French

Hello sugar people of the :fediverse: . My former collegue Bernard Henrissat now in 🇩🇰 is looking for a student in a Marie Sklodowska-Curie 🇪🇺 training network to work with him at the Technical University of Denmark. More info:
https://euraxess.ec.europa.eu/jobs/201030
The deadline for application is May 31st, 2024 and the job will start in November.

Skills desired: , general biology (++ ) and fluency in 🇬🇧.
Eligibility: the candidate should not have worked in 🇩🇰 before.

kloetzl, to bioinformatics

It's 2024. Most of #bioinformatics is yet to come and the best we can offer future generations of scientists is idiosyncratic R-scripts, massive Nextflow pipelines and file formats such as FastQ? We have to do better.

pyOpenSci, to random
@pyOpenSci@fosstodon.org avatar

Accepted into the pyOpenSci ecosystem in 2021, OpenOmics from Jonny Tran is a #Python library that helps with the integration of heterogeneous multi-omics #bioinformatics data through both an API and web interface.

OpenOmics supports:
🧬 Genomics, Transcriptomics, Proteomics, and Clinical data.
〰️ Harmonization with 20+ popular annotation, interaction, and disease-association databases, such as GENCODE, Ensembl, RNA Central, BioGRID, and DisGeNet

📄Docs: https://openomics.readthedocs.io/en/latest/

persagen, to llm
@persagen@mastodon.social avatar

Bioinformatics and Biomedical Informatics with ChatGPT: Year One Review
https://arxiv.org/abs/2403.15274

... covering omics, genetics, biomedical text mining, drug discovery, biomedical image understanding, bioinformatics programming, and bioinformatics education ...

bigcat_UM, to bioinformatics

hi, we're the #bioinformatics group BiGCaT at Maastricht University in The Netherlands, led by Prof. dr Chris Evelo (chair), Dr Susan Steinbusch-Coort, Dr Lars Eijssen, Dr Egon Willighagen, and Dr Friederike Ehrhart. More information on our homepage at http://www.bigcat.unimaas.nl/ #introduction

hexylena, to bioinformatics
@hexylena@galaxians.garden avatar

waking up to horrors well within my comprehension

i know so many viral annotation/phylogeny colleagues who would’ve loved this. #bioinformatics

lwpembleton, to programming
@lwpembleton@genomic.social avatar
jobRxiv, to bioinformatics
@jobRxiv@mas.to avatar

Postdoc

University of Tübingen

Having difficulty identifying specific microbes that drive disease?
Join the Mager lab in Tübingen and build a new technology to tackle this issue.

See the full job description on jobRxiv: https://jobrxiv.org/job/university-of-tubingen-27778-postdoc/?feed_id=68706


https://jobrxiv.org/job/university-of-tubingen-27778-postdoc/?feed_id=68706

bioconductor, to bioinformatics

✍️ Check out our blog post about the recent launch of the redesigned Bioconductor website: https://buff.ly/4bYFJEb

#BioconductorCommunity #Bioinformatics #RStats

moorejh, to bioinformatics
@moorejh@mastodon.online avatar

The UCLA Dept of Computational Medicine is recruiting tenure track faculty. The search focuses on Computational Genomics, Machine Learning in Health, Medical Imaging, and Mathematical Modeling. https://recruit.apo.ucla.edu/JPF08913 #bioinformatics #genomics #machinelearning

xgrau, to bioinformatics Catalan

We have two open positions to work on the bioinformatics team of the Biodiversity Cell Atlas initiative, at CRG (Barcelona).

Please contact Arnau Sebé if you're interested, as the deadline is next week — 10th of April!

Both positions are funded by the Moore Foundation.

bffo, to bioinformatics

Looks like another great year of #Bioinformatics #education workshops in Canada! These sell out fast. Register soon if you want a seat!
#RegistrationAwards available! Some #online, but most #Face2Face in 2024!

New workshops across new locations and new formats. More info & application form here: https://bioinformatics.ca/workshops/current-workshops/

mhucka, to science

Mark your calendars for the next HARMONY (Hackathon on Resources for Modeling in Biology), to be held at the University College London during April 8–11, 2024. A placeholder page is up now: https://co.mbine.org/events/
#SystemsBiology #ComputationalBiology #Biology #Bioinformatics #SyntheticBiology

mmarchin, to bioinformatics

Stowers is starting up a paid training program for bioinformatics, please share with anyone who might be interested in something like that! (in Kansas City)

https://www.stowers.org/gradschool/computational-biology-scholars

#bioinformatics

cazencott, to bioinformatics

Batch effects correction with ComBat or ComBat-Seq... but in Python? Glad to see the pyComBat paper finally out https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-023-05578-5

#bioinformatics #batchEffects

jobRxiv, to bioinformatics
@jobRxiv@mas.to avatar
mhucka, to bioinformatics

The UCI Center for Complex Biological Systems is hosting a short course on Systems Biology foundations in February–March, 2024.
https://ccbs.uci.edu/education/fasb-sc/
#SystemsBiology #ComputatonalBiology #CellBiology #Bioinformatics #Biology

janeadams, to linux
@janeadams@vis.social avatar

This is a hilarious* way to start a class mostly full of bio grads who are just starting to dip their toes into programming 🥴

*terrifying, deeply alienating

marcrr, to llm

Data Scientist (LLM and semantic data engineer) position at @SIB https://apply.refline.ch/499599/0305/pub/1/index.html #LLM #bioinformatics #job

foaylward, to bioinformatics
@foaylward@genomic.social avatar

Gotta check these out!

Robust, scalable, and informative clustering for diverse biological networks

https://genomebiology.biomedcentral.com/articles/10.1186/s13059-023-03062-0

#bioinformatics #genomics #genetics #statistics

IanSudbery, to bioinformatics
@IanSudbery@genomic.social avatar

Come work with us! I have a PhD position available to help understand which mutations in the non-coding parts of coding transcripts have functional consequences in Stem Cells.

We will using genome wide mesaurement of the effect of variation in miRNA binding sites to address when vairation causes changes in regulation and when it doesn't.

Mixed wetlab, bioinformatics and statistics project.

https://www.findaphd.com/phds/project/white-rose-bbsrc-dtp-how-can-we-identify-variants-in-untranslated-rna-that-affect-stem-cells/?p160958

#phdPosition #PhD #bioinformatics #UTR #miRNA #genetics

lgatto, to bioinformatics
@lgatto@fosstodon.org avatar

New bioinformatician position open in the lab, to work as part of the e-OMIX team:

  • Establish bioinformatics pipelines for preprocessing omics data.
  • Adhere to interoperability standards established by the FIHR consortium.
  • Integrate different types of omics data.
  • Conceive and automate data analyses pipelines.
  • Develop/contribute to #Bioconductor packages.

More details

#job #bioinformatics #proteomics #genomics #transcriptomics

linudz, to bioinformatics
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